BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C04SP1|AL427731
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1511 1742 0.0
>3x_Contig1511
Length = 8569
Score = 1742 bits (865), Expect = 0.0
Identities = 908/933 (97%), Gaps = 3/933 (0%)
Strand = Plus / Plus
Query: 1 atatcgtaccatacabggctaacaaggtatgaaacatggtgttgtcttttggtgtcttgg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5958 atatcgtaccatacatggctaacaaggtatgaaacatggtgttgtcttttggtgtcttgg 6017
Query: 61 ctgwgaatctwttctttcatatttgccatgaaacactttttctttgaaccggacacggac 120
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6018 ctgtgaatcttttctttcatatttgccatgaaacactttttctttgaaccggacacggac 6077
Query: 121 acggacacggacacgtctagcgtcttggtactccagacatttccatgcattactggaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6078 acggacacggacacgtctagcgtcttggtactccagacatttccatgcattactggaagg 6137
Query: 181 aaacttatgtaaggggaatggcgatccaatacaaataacggatctaagatctttgaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6138 aaacttatgtaaggggaatggcgatccaatacaaataacggatctaagatctttgaattt 6197
Query: 241 gggattaggacagactccctatagactgcatcgtgggcctaaatccactctctgcggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6198 gggattaggacagactccctatagactgcatcgtgggcctaaatccactctctgcggttt 6257
Query: 301 ctgtggttctatgtttgcctgaaacacaggaaagctttaaagamatgcaccccttttgcm 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 6258 ctgtggttctatgtttgcctgaaacacaggaaagctttaaagacatgcaccccttttgcc 6317
Query: 361 aatmctgatmatmtmmatmaagtamatmatmgaaatgamctgataamgaataatcctttt 420
||| ||||| || | || ||||| || || ||||||| ||||||| |||||||||||||
Sbjct: 6318 aatcctgatcatctccatcaagtacatcatcgaaatgacctgataacgaataatcctttt 6377
Query: 421 aggagtgaaaacaccgaatctmmaattgtttgaammaaaattgtacttmtgtttttgtag 480
||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct: 6378 aggagtgaaaacaccgaatctccaattgtttgaaccaaaattgtacttctgtttttgtag 6437
Query: 481 attaattttagtgtttacaaatttgttttgtttctgcgtcccattctgagcttgcaaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6438 attaattttagtgtttacaaatttgttttgtttctgcgtcccattctgagcttgcaaaaa 6497
Query: 541 atcgttcgaacgcgctgtaaagggaaatatatcaggccattgtttcaaaagctgcatttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6498 atcgttcgaacgcgctgtaaagggaaatatatcaggccattgtttcaaaagctgcatttg 6557
Query: 601 ggaatttccctattcgcgccgttagaggtctttcccgctttatacatggcgagagttgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6558 ggaatttccctattcgcgccgttagaggtctttcccgctttatacatggcgagagttgtt 6617
Query: 661 tttgtaaatacctttcagagtaatgccttcttctaaaccgctttgggtcaatacactggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6618 tttgtaaatacctttcagagtaatgccttcttctaaaccgctttgggtcaatacactggt 6677
Query: 721 caggtcaagtctagtctcccttgaaagtgcatgacgagatttgatttgcagctctctctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6678 caggtcaagtctagtctcccttgaaagtgcatgacgagatttgatttgcagctctctctg 6737
Query: 781 atttttgatccaacgtagaactgctgaagtggaccgtgggcgtatgagatatcaggaggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6738 atttttgatccaacgtagaactgctgaagtggaccgtgggcgtatgagatatcaggaggg 6797
Query: 841 gtgtaggatttacg-ccccccccccgatctgcacttgagttgcaaagaagctggc-aarc 898
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 6798 gtgtaggatttacgcccccccccccgatctgcacttgagttgcaaagaagctggcaaagc 6857
Query: 899 aaaa-cttccggtagttattttttttcttacta 930
|||| ||||||||||||||||||||||||||||
Sbjct: 6858 aaaaccttccggtagttattttttttcttacta 6890
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5944
Number of Sequences: 1807
Number of extensions: 5944
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)